Alle Publikationen
Urban, L. ; Miller, A.K. ; Eason, D. ; Vercoe, D. ; Shaffer, M. ; Wilkinson, S.P. ; Jeunen, G.J. ; Gemmell, N.J. ; Digby, A.
Non-invasive real-time genomic monitoring of the critically endangered kākāpō.Huang, L. ; Tang, S. ; Rietkerk, J. ; Appadurai, V. ; Krebs, M.D. ; Schork, A.J. ; Werge, T. ; Zuber, V. ; Kendler, K. ; Cai, N.
Polygenic analyses show important differences between MDD symptoms collected using PHQ9 and CIDI-SF.Noack, F. ; Vangelisti, S. ; Ditzer, N. ; Chong, F. ; Albert, M. ; Bonev, B.
Joint epigenome profiling reveals cell-type-specific gene regulatory programmes in human cortical organoids.Hörner, M. ; Becker, J. ; Bohnert, R. ; Baños, M. ; Jerez-Longres, C. ; Mühlhäuser, V. ; Härrer, D. ; Wong, T.W. ; Meier, M. ; Weber, W.
A photoreceptor-based hydrogel with red light-responsive reversible sol-gel transition as transient cellular matrix.Adams, C.I.M. ; Jeunen, G.J. ; Cross, H. ; Taylor, H.R. ; Bagnaro, A. ; Currie, K. ; Hepburn, C. ; Gemmell, N.J. ; Urban, L. ; Baltar, F. ; Stat, M. ; Bunce, M. ; Knapp, M.
Environmental DNA metabarcoding describes biodiversity across marine gradients.Lingg, J.G.P. ; Bischof, T.S. ; Arus, B.A. ; Cosco, E. ; Sletten, E.M. ; Rowlands, C.J. ; Bruns, O.T. ; Chmyrov, A.
Shortwave-infrared line-scan confocal microscope for deep tissue imaging in intact organs.Rädsch, T. ; Reinke, A. ; Weru, V. ; Tizabi, M.D. ; Schreck, N. ; Kavur, A.E. ; Pekdemir, B. ; Roß, T. ; Kopp-Schneider, A. ; Maier-Hein, L.
Labelling instructions matter in biomedical image analysis.Nawroth, J. ; Giez, C. ; Klimovich, A. ; Kanso, E. ; Bosch, T.C.G.
Spontaneous body wall contractions stabilize the fluid microenvironment that shapes host-microbe associations.Sánchez Quant, E.S. ; Richter, M. ; Colomé-Tatché, M. ; Martinez Jimenez, C.P.
Single-cell metabolic profiling reveals subgroups of primary human hepatocytes with heterogeneous responses to drug challenge.Gruber, T. ; Contreras, R. ; Sánchez Quant, E.S. ; Miok, V. ; Makris, K. ; Le Thuc, O. ; Gonzales García, I. ; Garcia-Clavé, E. ; Althammer, F. ; Krabichler, Q. ; DeCamp, L.M. ; Jones, R.G. ; Lutter, D. ; Williams, R.H. ; Pfluger, P.T. ; Müller, T.D. ; Woods, S.C. ; Pospisilik, J.A. ; Martinez-Jimenez, C.P. ; Tschöp, M.H. ; Grinevich, V. ; García-Cáceres, C.
High-calorie diets uncouple hypothalamic oxytocin neurons from a gut-to-brain satiation pathway via κ-opioid signaling.An, U. ; Pazokitoroudi, A. ; Alvarez, M. ; Huang, L. ; Bacanu, S.A. ; Schork, A.J. ; Kendler, K. ; Pajukanta, P. ; Flint, J. ; Zaitlen, N. ; Cai, N. ; Dahl, A. ; Sankararaman, S.
Deep learning-based phenotype imputation on population-scale biobank data increases genetic discoveries.Dahl, A. ; Thompson, M.L. ; An, U. ; Krebs, M.D. ; Appadurai, V. ; Border, R. ; Bacanu, S.A. ; Werge, T. ; Flint, J. ; Schork, A.J. ; Sankararaman, S. ; Kendler, K.S. ; Cai, N.
Phenotype integration improves power and preserves specificity in biobank-based genetic studies of major depressive disorder.West, A.G. ; Digby, A. ; Santure, A.W. ; Guhlin, J.G. ; Dearden, P. ; Taylor, M.W. ; Urban, L.
Capturing species-wide diversity of the gut microbiota and its relationship with genomic variation in the critically endangered kākāpō.Rosowski, S. ; Remmert, C. ; Marder, M. ; Akishiba, M. ; Bushe, J. ; Feuchtinger, A. ; Platen, A. ; Ussar, S. ; Theis, F.J. ; Wiedenmann, S. ; Meier, M.
Single-cell characterization of neovascularization using hiPSC-derived endothelial cells in a 3D microenvironment.Carvajal Maldonado, J. ; Lamm, L. ; Liu, Y. ; Righetto, R. ; Schnabel, J.A. ; Peng, T.
F2FD: Fourier Perturbations for Denoising Cryo-Electron Tomograms and Comparison to Established Approaches.Barbosa, I.A.M. ; Gopalakrishnan, R. ; Mercan, S. ; Mourikis, T.P. ; Martin, T. ; Wengert, S. ; Sheng, C. ; Ji, F. ; Lopes, R. ; Knehr, J. ; Altorfer, M. ; Lindeman, A. ; Russ, C. ; Naumann, U. ; Golji, J. ; Sprouffske, K. ; Barys, L. ; Tordella, L. ; Schübeler, D. ; Schmelzle, T. ; Galli, G.G.
Cancer lineage-specific regulation of YAP responsive elements revealed through large-scale functional epigenomic screens.Urban, L. ; Perlas Puente,A. ; Francino, O. ; Martí-Carreras, J. ; Muga, B.A. ; Mwangi, J.W. ; Boykin Okalebo, L. ; Stanton, J.A.L. ; Black, A. ; Waipara, N. ; Fontsere, C. ; Eccles, D. ; Urel, H. ; Reska, T.T.M. ; Morales, H.E. ; Palmada-Flores, M. ; Marques-Bonet, T. ; Watsa, M. ; Libke, Z. ; Erkenswick, G. ; van Oosterhout, C.
Real-time genomics for One Health.Merz, S. ; Breunig, M. ; Melzer, M.K. ; Heller, S. ; Wiedenmann, S. ; Seufferlein, T. ; Meier, M. ; Krüger, J. ; Mulaw, M.A. ; Hohwieler, M. ; Kleger, A.
Single-cell profiling of GP2-enriched pancreatic progenitors to simultaneously create acinar, ductal, and endocrine organoids.Wirth, J. ; Huber, N. ; Yin, K. ; Brood, S. ; Chang, S.C.-E. ; Martinez Jimenez, C.P. ; Meier, M.
Spatial transcriptomics using multiplexed deterministic barcoding in tissue.Theissinger, K. ; Fernandes, C. ; Formenti, G. ; Bista, I. ; Berg, P.R. ; Bleidorn, C. ; Bombarely, A. ; Crottini, A. ; Gallo, G.R. ; Godoy, J.A. ; Jentoft, S. ; Malukiewicz, J. ; Mouton, A. ; Oomen, R.A. ; Paez, S. ; Palsbøll, P.J. ; Pampoulie, C. ; Ruiz-López, M.J. ; Secomandi, S. ; Svardal, H. ; Theofanopoulou, C. ; de Vries, J. ; Waldvogel, A.M. ; Zhang, G. ; Jarvis, E.D. ; Bálint, M. ; Ciofi, C. ; Waterhouse, R.M. ; Mazzoni, C.J. ; Höglund, J. ; European Reference Genome Atlas Consortium (Urban, L.)
How genomics can help biodiversity conservation.Moore, J.L. ; Bhaskar, D. ; Gao, F. ; Matte-Martone, C. ; Du, S. ; Lathrop, E. ; Ganesan, S. ; Shao, L. ; Norris, R. ; Campamà Sanz, N. ; Annusver, K. ; Kasper, M. ; Cox, A. ; Hendry, C. ; Rieck, B. ; Krishnaswamy, S. ; Greco, V.
Cell cycle controls long-range calcium signaling in the regenerating epidermis.Klein, T. ; Yang, S. ; Tusty, M.A. ; Nayak, J.V. ; Chang, M.T. ; Bruns, O.T. ; Bischof, T.S. ; Valdez, T.A.
Development of a shortwave infrared sinuscope for the detection of cerebrospinal fluid leaks.von Schledorn, L. ; Puertollano Martín, D. ; Cleve, N. ; Zöllner, J. ; Roth, D. ; Staar, B.O. ; Hegermann, J. ; Ringshausen, F.C. ; Nawroth, J. ; Martin, U. ; Olmer, R.
Primary ciliary dyskinesia patient-specific hiPSC-derived airway epithelium in air-liquid interface culture recapitulates disease specific phenotypes in vitro.Arus, B.A. ; Cosco, E. ; Yiu, J. ; Balba, I. ; Bischof, T.S. ; Sletten, E.M. ; Bruns, O.T.
Shortwave infrared fluorescence imaging of peripheral organs in awake and freely moving mice.Fürtjes, G. ; Reinecke, D. ; von Spreckelsen, N. ; Meißner, A.K. ; Rueß, D. ; Timmer, M. ; Freudiger, C. ; Ion-Margineanu, A. ; Khalid, F. ; Watrinet, K. ; Mawrin, C. ; Chmyrov, A. ; Goldbrunner, R. ; Bruns, O.T. ; Neuschmelting, V.
Intraoperative microscopic autofluorescence detection and characterization in brain tumors using stimulated Raman histology and two-photon fluorescence.Guhlin, J. ; Le Lec, M.F. ; Wold, J. ; Koot, E. ; Winter, D. ; Biggs, P.J. ; Galla, S.J. ; Urban, L. ; Foster, Y. ; Cox, M.P. ; Digby, A. ; Uddstrom, L.R. ; Eason, D. ; Vercoe, D. ; Davis, T. ; Howard, J.T. ; Jarvis, E.D. ; Robertson, F.E. ; Robertson, B.C. ; Gemmell, N.J. ; Steeves, T.E. ; Santure, A.W. ; Dearden, P.K.
Species-wide genomics of kākāpō provides tools to accelerate recovery.Kolabas, Z.I. ; Kuemmerle, L. ; Perneczky, R. ; Förstera, B. ; Ulukaya, S. ; Ali, M. ; Kapoor, S. ; Bartos, L.M. ; Büttner, M. ; Caliskan, Ö.S. ; Rong, Z. ; Mai, H. ; Höher, L. ; Jeridi, D. ; Molbay, M. ; Khalin, I. ; Deligiannis, I.K. ; Negwer, M. ; Roberts, K. ; Simats, A. ; Carofiglio, O. ; Todorov, M.I. ; Horvath, I. ; Öztürk, F. ; Hummel, S. ; Biechele, G. ; Zatcepin, A. ; Unterrainer, M. ; Gnörich, J. ; Roodselaar, J. ; Shrouder, J. ; Khosravani, P. ; Tast, B. ; Richter, L. ; Díaz-Marugán, L. ; Kaltenecker, D. ; Lux, L. ; Chen, Y. ; Zhao, S. ; Rauchmann, B.S. ; Sterr, M. ; Kunze, I. ; Stanic Aguilera, K.N. ; Kan, V.W.Y. ; Besson-Girard, S. ; Katzdobler, S. ; Palleis, C. ; Schädler, J. ; Paetzold, J.C. ; Liebscher, S. ; Hauser, A.E. ; Gokce, O. ; Lickert, H. ; Steinke, H. ; Benakis, C. ; Braun, C. ; Martinez Jimenez, C.P. ; Buerger, K. ; Albert, N.L. ; Höglinger, G. ; Levin, J. ; Haass, C. ; Kopczak, A. ; Dichgans, M. ; Havla, J. ; Kümpfel, T. ; Kerschensteiner, M. ; Schifferer, M. ; Simons, M. ; Liesz, A. ; Krahmer, N. ; Bayraktar, O.A. ; Franzmeier, N. ; Plesnila, N. ; Erener, S. ; Puelles, V.G. ; Delbridge, C. ; Bhatia, H.S. ; Hellal, F. ; Elsner, M. ; Bechmann, I. ; Ondruschka, B. ; Brendel, M. ; Theis, F.J. ; Ertürk, A.
Distinct molecular profiles of skull bone marrow in health and neurological disorders.Atwell, S. ; Waibel, D.J.E. ; Shetab Boushehri, S. ; Wiedenmann, S. ; Marr, C. ; Meier, M.
Label-free imaging of 3D pluripotent stem cell differentiation dynamics on chip.McCaw, Z.R. ; O'Dushlaine, C. ; Somineni, H. ; Bereket, M. ; Klein, C. ; Karaletsos, T. ; Casale, F.P. ; Koller, D. ; Soare, T.W.
An allelic-series rare-variant association test for candidate-gene discovery.Arteaga Cardona, F. ; Jain, N. ; Popescu, R. ; Busko, D. ; Madirov, E. ; Arus, B.A. ; Gerthsen, D. ; De Backer, A. ; Bals, S. ; Bruns, O.T. ; Chmyrov, A. ; Van Aert, S. ; Richards, B.S. ; Hudry, D.
Preventing cation intermixing enables 50% quantum yield in sub-15 nm short-wave infrared-emitting rare-earth based core-shell nanocrystals.Nawroth, J. ; Roth, D. ; van Schadewijk, A. ; Ravi, A. ; Maulana, T.I. ; Senger, C.N. ; van Riet, S. ; Ninaber, D.K. ; de Waal, A.M. ; Kraft, D. ; Hiemstra, P.S. ; Ryan, A.L. ; van der Does, A.M.
Breathing on chip: Dynamic flow and stretch accelerate mucociliary maturation of airway epithelium in vitroAlvarez, L. ; Marín-García, P.J. ; Rentero-Garrido, P. ; Martinez Jimenez, C.P. ; Llobat, L.
Interleukin 6 and interferon gamma haplotypes are related to cytokine serum levels in dogs in an endemic Leishmania infantum region.Kulaj, K. ; Harger, A. ; Bauer, M. ; Caliskan, Ö.S. ; Gupta, T.K. ; Chiang, D.M. ; Milbank, E. ; Reber, J. ; Karlas, A. ; Kotzbeck, P. ; Sailer, D.N. ; Volta, F. ; Lutter, D. ; Prakash, S. ; Merl-Pham, J. ; Ntziachristos, V. ; Hauner, H. ; Pfaffl, M.W. ; Tschöp, M.H. ; Müller, T.D. ; Hauck, S.M. ; Engel, B.D. ; Gerdes, J.M. ; Pfluger, P.T. ; Krahmer, N. ; Stemmer, K.
Adipocyte-derived extracellular vesicles increase insulin secretion through transport of insulinotropic protein cargo.