CFAssay: An R-package that provides functions for calculation of linear-quadratic cell survival curves and for ANOVA of experimental 2-way designs along with the colony formation assay. CFAssay at Bioconductor

CFAcoop: Analysis of clonogenic assay data taking into account cellular cooperation. CFAcoop at CRAN

splineTimeR: Time-course differential gene expression data analysis using spline regression models followed by gene association network reconstruction. splineTimeR at Bioconductor