Design Color Big Genomic Data Visualization Vector

Hansen Lab

Bioinformatics

About our Research

"The management and analysis of increasingly large amounts of research data is of enormous importance for the understanding of fundamental metabolic processes, their regulation and the subsequent development of innovative approaches to disease therapy."

The Bioinformatics team at the MCD develops informatics infrastructures for the management of data and performs gene function analysis, the analysis of high-throughput and omics data, the modeling of genetic and protein interaction networks, and of statistical data. We develop databases and software tools for data storage, data exchange and data visualization, and software to assist in the design of genome-wide gene editing experiments and the evaluation of RNA guide sequences for the CRISPR/Cas9 system. In addition, we work on the modeling of genetic interactions and extend regulatory networks by predicting genetic interactions using high-throughput gene expression data and in-silico promoter analysis based on sophisticated statistical analysis

PI of Bioinformatics

Porträt Jens Hansen
Dr. Jens Hansen

Group Leader

Highlight Publications

Schmidt S*, Luecken MD*, Trümbach D*, Hembach S, Niedermeier KM, Wenck N, Pflügler K, Stautner C, Böttcher A, Lickert H, Ramirez-Suastegui C, Ahmad R, Ziller MJ, Fitzgerald JC, Ruf V, van de Berg WDJ, Jonker AJ, Gasser T, Winner B, Winkler J, Vogt Weisenhorn DM, Giesert F, Theis FJ, Wurst W. (2022)

Primary cilia and SHH signaling impairments in human and mouse models of Parkinson's disease. Nat Commun. 2022 Aug 16;13(1):4819.

Wefers B, Panda SK, Ortiz O, Brandl C, Hensler S, Hansen J, Wurst W, Kühn R (2013)

Generation of targeted mouse mutants by embryo microinjection of TALENs. Nature Protocols 8(12), 2355-2379

Horn C*, Hansen J*, Schnütgen, F., Seisenberger, C., Floss, T., Irgang, M., De-Zolt, S., Wurst, W., von Melchner, H., Ruiz Noppinger, P. (2007)

Splinkerette PCR for more efficient characterization of gene trap events. Nature Genetics 39, 933 - 934

Contact

Porträt Jens Hansen
Dr. Jens Hansen

Group Leader