Computational Health Center

We develop novel computational tools powered by AI to accelerate discovery and translation. We apply cutting-edge computational methods to promote personalised health. Collaboratively, we develop predictive algorithms as well as mechanistic models to analyse molecular, imaging, and clinical data of human health and disease. We thus help to create innovative diagnostics and novel treatments for environmentally triggered diseases.

We develop novel computational tools powered by AI to accelerate discovery and translation. We apply cutting-edge computational methods to promote personalised health. Collaboratively, we develop predictive algorithms as well as mechanistic models to analyse molecular, imaging, and clinical data of human health and disease. We thus help to create innovative diagnostics and novel treatments for environmentally triggered diseases.

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Our Research Areas

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Digital Genomics and Image Computing

We develop robust methods for analyzing big data to address key biomedical challenges and consolidate analytical approaches using innovative digital methods. In addition, we develop novel statistical methods for trans- ethnic meta-analysis, testing for pleiotropy, rare variant burden, testing, and polygenic risk score construction.

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Health AI

We develop and translate AI technologies for biomedical problems by constructing deep-learning methods and combining them with more mechanistic modeling approaches. In addition, we steer the computational aspects of developing single-cell atlases in healthy and disease state to build AI-driven analytics platforms for multimodal data, in particular from genomics and diverse imaging modalities.

Sytems Biomedicine

Systems Biomedicine

We develop novel computational methods for multiomic data integration of epigenomic, transcriptomic, proteomic and genetic data and advanced phenotypic/in vivo observations. In addition, we design novel approaches for efficient data combination across omics levels, maximizing the information yield across the multidimensional space of datar from genomics and diverse imaging modalities.

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Rise up! funding program Daniel Kotlarz

Awards & Grants, Computational Health, ITG,

Funding to Advance Precision Medicine for Inflammatory Bowel Disease in Children

Daniel Kotlarz, group leader at the Institute of Translational Genomics at Helmholtz Munich and Heisenberg Professor of Precision Medicine of Pediatric Inflammatory Bowel Diseases at LMU University Hospital Munich receives around 600,000 Euros…

FEBS|EMBO Women in Science Prize for Eleftheria Zeggini

Awards & Grants, Computational Health, ITG,

Eleftheria Zeggini Receives FEBS | EMBO Women in Science Award 2027

Prof. Eleftheria Zeggini has been awarded the FEBS | EMBO Women in Science Award 2027 for her pioneering contributions to human genomics and the translation of large-scale genetic discoveries into biological and clinical insights, alongside her…

KI-gestützte Analyse von Zellmembranen

AI, Computational Health, AIH, IML,

Weeks of Work in a Few Hours: AI Tool Reads Cell Membranes

Cell membranes and the proteins within them control many vital processes and play a key role in health and disease. But studying them in 3D images of cells has so far meant slow, manual work. A team from Helmholtz Munich, the Technical University of…

Dancing Protein

Awards & Grants, Computational Health, ICB, Molecular Targets and Therapeutics, STB,

Reid Alderson Receives ERC Starting Grant for Protein-DANCE

Dr. Reid Alderson from the Institute of Structural Biology and the Institute of Computational Biology at Helmholtz Munich has received a Starting Grant from the European Research Council (ERC). Through the Protein-DANCE project, he will develop a new…

Brain with neural Laptop

AI, Awards & Grants, Computational Health, HCA,

Marcel Binz Receives ERC Starting Grant for MIDAS

Dr. Marcel Binz from the Institute for Human-Centered AI at Helmholtz Munich has received a Starting Grant from the European Research Council (ERC). Through the MIDAS project, he will develop large-scale computational models designed to simulate,…

Doctor working with AI Consultans

AI, Transfer, Computational Health, AIH,

Helmholtz Munich Launches M1 Clinical AI Consultants to Bring AI Research to Patient Care

A new interdisciplinary team at Helmholtz Munich aims to bridge one of healthcare AI's longstanding challenges: translating promising algorithms into tools that perform reliably in clinical practice. The M1 Clinical AI Consultants, based at the…

Upcoming Computational Health Seminars

Vaclav Veverka

22.09.2026


Host: Iva Pritisanac
Title: TBD
Time: TBD
Location: Hybrid

Ylva Ivarsson

22.10.2026


Host: Iva Pritisanac
Title: TBD
Time: 16.00 (CEST)
Location: Hybrid

Our Principal Investigators

Explainable Machine Learning

Zeynep Akata

Helmholtz Pioneer Campus

Nico Battich

Data Science and Intelligent Systems

Stefan Bauer

Systems Genetics and Machine Learning

Paolo Casale

Computational Epigenomics

Maria Colomé-Tatché

Translational Systems Immunology

Can Ergen

Machine Learning and Data Analytics

Björn Eskofier

Efficient Learning and Probabilistic Inference for Science (ELPIS)

Vincent Fortuin

Computational Molecular Medicine

Julien Gagneur

Genetic and Epigenetic Gene Regulation

Matthias Heinig

Machine Learning for Biological Discovery

Michael Heinzinger

Computation and Machine Learning

Dominik Jüstel

Reliable AI

Georgios Kaissis

Reliable Machine Learning

Niki Kilbertus

Immunogenomics

Sarah Kim-Hellmuth

Immunogenomics

Daniel Kotlarz

AI for Genomic Medicine

Johannes Linder

Accessible Biomedical AI Research

Sebastian Lobentanzer

Single-Cell and Long-Read RNA Regulation Lab – AI for Kids

Mariela Cortés López

Integrative Genomics

Malte Lücken

Institute of AI for Health

Carsten Marr

Computational RNA Biology

Annalisa Marsico

Computational Biomedicine

Michael Menden

Computational Statistics and Data Science for Biological Systems

Christian Müller

Neurogenetic Systems Analysis

Konrad Oexle

AI for microscopy and computational pathology

Tingying Peng

Helmholtz AI

Marie Piraud

Institute of Structural Biology

Iva Pritišanac

Multiomics for Disease Diagnostics

Holger Prokisch

Machine Learning in Biomedical Imaging

Julia Schnabel

Dynamical Inference

Steffen Schneider

Translational Immunoinformatics

Benjamin Schubert

Human-Centered AI

Eric Schulz

Physics and data-based modelling of cellular decision making

Antonio Scialdone

Machine Learning and Data Science

Hannah Spitzer

Institute of AI for Health

Ewa Szczurek

Machine Learning

Fabian Theis

Metabolomics

Rui Wang-Sattler

Pioneer Campus

Lara Urban

Translational Genomics

Ele Zeggini

A visualization of a machine learning model deployment with predictions being made on new data. The environment, Generative AI

International Conference Contributions

Follow the link to find the latest contributions from Computational Health Center researchers at international AI conferences:

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Health AI Fellows Program

Postdoctoral Health AI Fellows Program

The newly established Postdoctoral Health AI Fellows (HAIF) Program is dedicated to fostering independent, high-impact research in computational biomedicine and health-related AI. Our mission is to empower early-career postdoctoral scientists from computational, mathematical, engineering, and physical science disciplines by granting them early scientific independence to boldly address key challenges in computational biomedicine.

Recent advances in computation have transformed our understanding of molecular processes and their effects on health and disease. Breakthroughs in modeling, AI, and large-scale data analysis have reshaped biomedicine, enabling researchers to extract meaningful insights from increasingly complex biological datasets. As high-throughput technologies generate vast volumes of data, new challenges emerge in scale, management, analysis, and interpretation. Yet, these same developments open unprecedented opportunities to uncover complex biological mechanisms, predict system behavior, and understand pathophysiological processes. 

Unlike traditional postdoctoral positions, HAIF fellows join the Computational Health Center (CHC) at Helmholtz Munich as independent early-career researchers with greater autonomy. Each fellow has access to mentoring by two senior researchers, either two CHC Principal Investigators or one Principal Investigator and one external expert from a university, industry, or a start-up. With this support structure, fellows have the freedom to develop and apply comprehensive computational strategies to tackle challenges in health research. 

By leveraging experimental, computational, and statistical approaches, the HAIF Program empowers fellows to explore new scientific frontiers that integrate data-driven and experimental methodologies. Working closely with experimental partners in Munich and beyond, fellows bring fresh perspectives to significant biological and biomedical challenges—stimulating innovation and driving the development of transformative solutions.

The call for applications will open in mid-December!
 

Recent Publications

J. Clin. Invest. 136:e195121 (2026)

Kadri, S. ; Mattner, L. ; Zeng, Z. ; Prakki, S.R.S. ; Verma, A.K. ; Cetin, U. ; Mayr, C.H. ; Ansari, M. ; Wei, X. ; Asgharpour, S. ; Wasik, A. ; Kneidinger, N. ; Stoleriu, M. ; Behr, J. ; Polleux, J. ; Yildirim, A.Ö. ; Sadeleer, L.J.D. ; Wuyts, W. ; Burgstaller, G. ; Mann, M. ; Mück-Häusl, M. ; Schiller, H.B.

Mechanosensitive phosphorylation of NFATC4 at S213/S217 drives fibroblast-to-myofibroblast transition and fibrosis.
2026 in
In: Essentials of Fat Grafting. 2026. 351-358

Berger, C. ; Kempa, S. ; Jung, E.M.

Imaging Techniques for Adipose Tissue Analysis.
EBioMedicine 131:106458 (2026)

Semmler, L. ; Büchner, B. ; Kornblum, C. ; Deschauer, M. ; Wortmann, S. ; Morgia, C.L. ; Servidei, S. ; Freisinger, P. ; Mensch, A. ; Schuelke, M. ; Prokisch, H. ; Mancuso, M. ; Lamperti, C. ; Klopstock, T. ; Bertini, E. ; Bischoff, A.T. ; Boy, N. ; Bruno, C. ; Carelli, V. ; Cecchi, G. ; Claeys, K. ; Distelmaier, F. ; Filosto, M. ; Garone, C. ; Hempel, M. ; Karall, D. ; Kmop, C. ; Kotzaeridou, R. ; Lopriore, P. ; Mongini, T. ; Montano, V. ; Musumeci, O. ; Nicoletta, V. ; Primiano, G. ; Procopio, E. ; Rinaldi, R. ; Ruggiero, L. ; Santer, R. ; Sasse, H. ; Schäfer, J. ; Schlein, C. ; Schöls, L. ; Strube, D. ; Thaele, A. ; Valentino, M.L. ; Kleist, J.v. ; Zeng, L.

Mitochondrial diabetes mellitus: Real world insights from the GENOMIT registry–a multinational, longitudinal cohort study.
Cardiovasc. Diabetol., DOI: 10.1186/s12933-026-03329-3 (2026)

Primio, C.D. ; Hafeez, K.S. ; Casalone, E. ; Filomena, R. ; Rosselli, M. ; Russo, A. ; Allione, A. ; Guarrera, S. ; Riccardi, B. ; Balfanz, P. ; Jacobs, B. ; Devaux, Y. ; Bermejo, J. ; Heymans, S.R.B. ; Gaborit, B. ; Bergerot, C. ; Sohler, F. ; Liechti, R. ; Martin, O. ; Lascano-Maillard, J. ; Ibberson, M. ; Audureau, E. ; Wang-Sattler, R. ; Lang, C.C. ; Sam, F. ; Derumeaux, G. ; Matullo, G.

Unmasking subclinical cardiac dysfunction in type 2 diabetes through genetic and epigenetic profiling.
Nat. Rev. Cancer, DOI: 10.1038/s41568-026-00975-3 (2026)

Chalabi, M. ; Coorens, T. ; Li, L. ; Reading, J.L. ; Shen, S. ; Szczurek, E.

The next 25 years of cancer research: Emerging perspectives and priorities.
Paediatr. Croat. 70, 74-85 (2026)

Miljanić, K. ; Žigman, T. ; Tomac, V. ; Pušeljić, S. ; Zrno, N. ; Fumić, K. ; Ozretić, D. ; Mayr, J.A. ; Prokisch, H. ; Barić, I. ; Petković Ramadža, D.

Clinical, neuroimaging, genetic, and outcome characteristics of Leigh syndrome: Experience from a single tertiary center.
Comput. Vis. Image Underst. 271:104885 (2026)

Madni, H.A. ; Umer, R.M. ; Marr, C. ; Foresti, G.L.

MOSAIC: Maximizing out-of-distribution sensitivity via aligned image classification.
Am. J. Physiol.-Heart Circul. Physiol. 331, H669-H687 (2026)

Kupecz, K. ; Galla, Z. ; Losonczi, R. ; Volford, D. ; Siska, A. ; Sejben, A. ; Kohistani, M. ; Kis, M. ; Somogyi, R. ; Greschik, Z.A. ; Kriston, A. ; Kovács, F. ; Horvath, P. ; Földesi, I. ; Monostori, P. ; Cserni, G. ; Kahán, Z. ; Sárközy, M.

Potential role of tryptophan metabolites in the sex-based differences in doxorubicin-induced chronic cardiotoxicity in a rat model.

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Networks and Affiliations

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Technical University of Munich

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Munich Center for Machine Learning

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Single Cell Omics Germany


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Ludwig-Maximilians-Universität München

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Ellis Munich


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Helmholtz International Lab: CausalCellDynamics

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Munich School for Data Science

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Contact

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Dr. Anna Sacher

Head of Science Management & Administration, Institute of Computational Biology

Ingolstädter Landstraße 1, 85764 Neuherberg

Building / Room: 58a, 105

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Helmholtz AI

Democratising AI for a Data-Driven Future